Entry

ID: sbc-miR159h
Alias: F47.I000001.A11
Sequence: UUGGACUGAAGGGAGCUC
Description: microRNA MIR159 predicted
Species: 黄芩 Species latin name: Scutellaria baicalensis
TCM Name: Huangqin(黄芩)
TCM Resource (Sample number): 黄芩(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

ala-miR159k; apl-miR159ao; bca-miR159h; bmj-miR159h; cco-miR159am; ccs-miR159aj; cof-miR159h; cpi-miR159f; dst-miR159k; gma-miR159ah; gmc-miR159h; ini-miR159f; lpu-miR159am; mca-miR159ai; nnu-miR159al; pav-miR159al; por-miR159am; psu-miR159ai; rcr-miR159ak; rja-miR159am; sbc-miR159h; smi-miR159aj; ssu-miR159f; twi-miR159i; vof-miR159f;

Rfam Alignments

>> MIR159  microRNA MIR159
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0025   18.2   0.0  cm      165      182 ~~           1          18 + ~~ 1.00 5'&3' 0.56
                      ???????  ????????       NC
              ~~~~~~~->>>>>>>-->>>>>>>>~~~~~~ CS
   MIR159   1 <[164]*UUGGAcuGAAGGGAGCUC*[14]> 196
                     UUGGACUGAAGGGAGCUC
vof-miR159f   1 <[  0]*UUGGACUGAAGGGAGCUC*[ 0]> 18
              .......******************...... PP

Targets

Predicted by TargetFinder

NM_000131 ; NM_001010915 ; NM_001012991 ; NM_001047160 ; NM_001123364 ; NM_001130438 ; NM_001134774 ; NM_001134775 ; NM_001134776 ; NM_001166347 ; NM_001166348 ; NM_001166349 ; NM_001171740 ; NM_001171741 ; NM_001172128 ; NM_001195532 ; NM_001198595 ; NM_001242826 ; NM_001243540 ; NM_001243541 ; NM_001256850 ; NM_001267550 ; NM_001267554 ; NM_001267609 ; NM_001267610 ; NM_001267611 ; NM_001267612 ; NM_001267613 ; NM_001267614 ; NM_001271999 ; NM_001272000 ; NM_001272001 ; NM_001278683 ; NM_001278685 ; NM_001286191 ; NM_001286192 ; NM_001286195 ; NM_001286196 ; NM_001286197 ; NM_001286198 ; NM_001286247 ; NM_001300860 ; NM_001305275 ; NM_001307985 ; NM_001309426 ; NM_001309427 ; NM_001310121 ; NM_001310123 ; NM_001318734 ; NM_001318859 ; NM_001318860 ; NM_001318861 ; NM_001318862 ; NM_001318863 ; NM_001320766 ; NM_001321265 ; NM_001321266 ; NM_001321267 ; NM_001321883 ; NM_001321903 ; NM_001321920 ; NM_001321922 ; NM_001321923 ; NM_001330221 ; NM_001330614 ; NM_001348527 ; NM_001348528 ; NM_001348529 ; NM_001348530 ; NM_001348531 ; NM_001348532 ; NM_001348533 ; NM_001348534 ; NM_001348535 ; NM_001348536 ; NM_001348537 ; NM_001349632 ; NM_001349633 ; NM_001349634 ; NM_001349635 ; NM_001352684 ; NM_001352685 ; NM_001352686 ; NM_001354225 ; NM_001354228 ; NM_001354230 ; NM_001354236 ; NM_001354245 ; NM_001354249 ; NM_001354253 ; NM_001354257 ; NM_001354260 ; NM_001354278 ; NM_001354594 ; NM_001354595 ; NM_001363759 ; NM_001363765 ; NM_001363943 ; NM_001364689 ; NM_001364690 ; NM_001364727 ; NM_001367561 ; NM_001372574 ; NM_001522 ; NM_002440 ; NM_002973 ; NM_003076 ; NM_003127 ; NM_003297 ; NM_003319 ; NM_003853 ; NM_004513 ; NM_004537 ; NM_005245 ; NM_005445 ; NM_005480 ; NM_005785 ; NM_005863 ; NM_005879 ; NM_006873 ; NM_012152 ; NM_012406 ; NM_012465 ; NM_014448 ; NM_014829 ; NM_014906 ; NM_015565 ; NM_015603 ; NM_016128 ; NM_016201 ; NM_016210 ; NM_016337 ; NM_017742 ; NM_018484 ; NM_019616 ; NM_020447 ; NM_022781 ; NM_022822 ; NM_022895 ; NM_024546 ; NM_024923 ; NM_032862 ; NM_033208 ; NM_033223 ; NM_033407 ; NM_080916 ; NM_080918 ; NM_133378 ; NM_133432 ; NM_133437 ; NM_138694 ; NM_138799 ; NM_139071 ; NM_152556 ; NM_152599 ; NM_152663 ; NM_153832 ; NM_170724 ; NM_172217 ; NM_173626 ; NM_173808 ; NM_194328 ; NM_194329 ; NM_194330 ; NM_194332 ; NM_194358 ; NM_194359 ; NM_198576 ; NM_199242 ; NR_003659 ; NR_003682 ; NR_024077 ; NR_024540 ; NR_024628 ; NR_024629 ; NR_027708 ; NR_027709 ; NR_029401 ; NR_033908 ; NR_040053 ; NR_048561 ; NR_051961 ; NR_073040 ; NR_104409 ; NR_105002 ; NR_110763 ; NR_121582 ; NR_125341 ; NR_126534 ; NR_132119 ; NR_132311 ; NR_134893 ; NR_134894 ; NR_134895 ; NR_134896 ; NR_134897 ; NR_134898 ; NR_135112 ; NR_135598 ; NR_135599 ; NR_135600 ; NR_135603 ; NR_135604 ; NR_135605 ; NR_135841 ; NR_135842 ; NR_135843 ; NR_135844 ; NR_135845 ; NR_135846 ; NR_135847 ; NR_135848 ; NR_135849 ; NR_135850 ; NR_135851 ; NR_135852 ; NR_135853 ; NR_135854 ; NR_145770 ; NR_148035 ;

Predicted by TAPIR

NM_001004434 ; NM_001010915 ; NM_001080554 ; NM_001130072 ; NM_001130438 ; NM_001134774 ; NM_001134775 ; NM_001145815 ; NM_001166269 ; NM_001166270 ; NM_001166348 ; NM_001166349 ; NM_001171740 ; NM_001174071 ; NM_001198595 ; NM_001204218 ; NM_001206843 ; NM_001242826 ; NM_001278683 ; NM_001278685 ; NM_001282987 ; NM_001282988 ; NM_001282990 ; NM_001286191 ; NM_001286192 ; NM_001286195 ; NM_001286196 ; NM_001286197 ; NM_001286198 ; NM_001318734 ; NM_001318860 ; NM_001318861 ; NM_001321883 ; NM_001321903 ; NM_001321922 ; NM_001321923 ; NM_001329713 ; NM_001329714 ; NM_001329715 ; NM_001330449 ; NM_001350151 ; NM_001353980 ; NM_001363759 ; NM_001367358 ; NM_001367359 ; NM_001367360 ; NM_001367361 ; NM_001367362 ; NM_001367363 ; NM_001368007 ; NM_001369788 ; NM_001371328 ; NM_002440 ; NM_003127 ; NM_003319 ; NM_005245 ; NM_005445 ; NM_005863 ; NM_005879 ; NM_006873 ; NM_012152 ; NM_013254 ; NM_014191 ; NM_015565 ; NM_015944 ; NM_016201 ; NM_016210 ; NM_017815 ; NM_020447 ; NM_021004 ; NM_021080 ; NM_024747 ; NM_030648 ; NM_032513 ; NM_033208 ; NM_033223 ; NM_139071 ; NM_173626 ; NM_173808 ; NM_178276 ; NM_194359 ; NM_198083 ; NM_199242 ; NR_024345 ; NR_040053 ; NR_048561 ; NR_073040 ; NR_126060 ; NR_132119 ; NR_135842 ; NR_135849 ; NR_135850 ; NR_135851 ; NR_135854 ; NR_138087 ; NR_138088 ;

The Bencao (Herbal) Database（本草数据库）

Accession: B59655951