Accession: B63109714

Entry
Homologs
Rfam Alignments
Targets

Entry

ID: sor-lin-4k
Alias: F18150.M000042.A11
Sequence: UCCCUGAGACUCUAACUUGUGA
Description: lin-4 microRNA precursor predicted,partially
Species: 豨莶 Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

cit-lin-4k; hcr-lin-4f; sor-lin-4k;

Rfam Alignments

>> lin-4  lin-4 microRNA precursor
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0091   18.3   0.0  cm        7       28 ~~           1          22 + ~~ 1.00 5'&3' 0.45
                               ??? ???? ??? ????????       NC
                         ~~~~~-<<<-<<<<-<<<-<<<<<<<<~~~~~~ CS
                lin-4  1 <[6]*UCCCUGAGACCccAAcuuGUGA*[43]> 71
                              UCCCUGAGAC C AACUUGUGA
           sor-lin-4k  1 <[0]*UCCCUGAGACUCUAACUUGUGA*[ 0]> 22
                         .....**********************...... PP

Targets

Predicted by TargetFinder

NM_198535 ;

Predicted by TAPIR

NM_000310 ; NM_001142604 ; NM_001363695 ; NR_108100 ;