The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR8
  5. sor-miR8i

Accession: B63204194

Entry

ID: sor-miR8i
Alias: F230400.O000006.A25
Sequence: UAAUACUGCCUGGUAAUGAUGACA
Description: mir-8/mir-141/mir-200 microRNA precursor family predicted,partially
Species: 豨莶  Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)  
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR8o; bca-miR8p; cas-miR8d; cfe-miR8l; cit-miR8k; cmd-miR8r; csp-miR8h; fmu-miR8k; hcr-miR8o; poe-miR8u; ppr-miR8m; sgi-miR8j; sor-miR8i;

Rfam Alignments

>> mir-8  mir-8/mir-141/mir-200 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0015   20.9   0.0  cm       48       69 ~.           1          22 + ~. 1.00    5' 0.36
                                                             ?????????   ???? ????? NC
                                                       ~~~~~~>>>>>>>>>--->>>>->>>>> CS
                                              mir-8  9 <[39]*uAAcACUGcCUGGUAAuGAUGg 69
                                                             UAA ACUGCCUGGUAAUGAUG
                                          sor-miR8i  1 <[ 0]*UAAUACUGCCUGGUAAUGAUGA 22
                                                       ......9********************* PP

Targets

Predicted by TargetFinder


Predicted by TAPIR

NM_001042494 ;   NM_001042495 ;   NM_001042496 ;   NM_001042497 ;   NM_001267722 ;   NM_001365088 ;   NM_001365088 ;   NM_005135 ;   NM_006947 ;   NM_133647 ;   NR_151856 ;