The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR30
  5. sor-miR30al

Accession: B63029954

Entry

ID: sor-miR30al
Alias: F3769.M000041.A25*
Sequence: CUUUCAGUCGGAUGUUUACAGU
Description: mir-30 microRNA precursor predicted,partially
Species: 豨莶  Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)  
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR30ae; acr-miR30a; cit-miR30am; cmd-miR30af; hcr-miR30ad; poe-miR30af; ppr-miR30ad; sgi-miR30ac; sor-miR30al; tki-miR30ad;

Rfam Alignments

>> mir-30  mir-30 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0019   22.3   0.0  cm       41       60 ~]           1          20 + ~. 1.00    5' 0.40
                                                                  ???????????????????  NC
                                                            ~~~~~~>>>>>>>>>>>>>>>>>>>: CS
                                                  mir-30  1 <[40]*CUuuCaGUCgGAUGUUUgCu 60
                                                                  CUUUCAGUCGGAUGUUU C+
                                             tki-miR30ad  1 <[ 0]*CUUUCAGUCGGAUGUUUACA 20
                                                            ......******************** PP

Targets

Predicted by TargetFinder


Predicted by TAPIR