The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR23
  5. sor-miR23bm

Accession: B63180828

Entry

ID: sor-miR23bm
Alias: F104498.M000117.A25*
Sequence: AUCACAUUGCCAGGGAUUACCA
Description: microRNA mir-23 predicted
Species: 豨莶  Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)  
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR23n; asc-miR23h; bca-miR23n; bch-miR23l; bpi-miR23f; cci-miR23f; cfe-miR23m; cit-miR23bn; cmd-miR23u; cof-miR23g; csu-miR23b; fmu-miR23d; hcr-miR23t; ljp-miR23e; poe-miR23au; pvl-miR23a; sbc-miR23; sch-miR23d; sor-miR23bm; vph-miR23f;

Rfam Alignments

>> mir-23  microRNA mir-23
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   3.6e-05   25.1   0.0  cm       47       68 ~~           1          22 + ~~ 1.00 5'&3' 0.45
                                                                 ???      ?????????          NC
                                                           ~~~~~~>>>------>>>>>>>>>::::~~~~~ CS
                                                 mir-23  1 <[46]*AUCACAUUGCCAGGGAuUuCCA*[7]> 75
                                                                 AUCACAUUGCCAGGGAUU+CCA
                                             vph-miR23f  1 <[ 0]*AUCACAUUGCCAGGGAUUACCA*[0]> 22
                                                           ......**********************..... PP

Targets

Predicted by TargetFinder

NM_001024611 ;   NM_001257197 ;   NM_001257198 ;   NM_003590 ;  

Predicted by TAPIR

NM_001257197 ;   NM_001257198 ;   NM_003590 ;