The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR23
  5. sor-miR23az

Accession: B63135092

Entry

ID: sor-miR23az
Alias: F31977.K000083.A11*
Sequence: AUCACAUUGCCAGGGAUUAC
Description: microRNA mir-23 predicted
Species: 豨莶  Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)  
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR23i; bca-miR23i; bch-miR23f; cit-miR23bb; hcr-miR23l; poe-miR23am; sor-miR23az;

Rfam Alignments

>> mir-23  microRNA mir-23
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00041   21.5   0.0  cm       47       66 ~~           1          20 + ~~ 1.00 5'&3' 0.45
                   ???      ?????????        NC
             ~~~~~~>>>------>>>>>>>>>::~~~~~ CS
   mir-23  1 <[46]*AUCACAUUGCCAGGGAuUuC*[9]> 75
                   AUCACAUUGCCAGGGAUU+C
sor-miR23az  1 <[ 0]*AUCACAUUGCCAGGGAUUAC*[0]> 20
             ......********************..... PP

Targets

Predicted by TargetFinder

NM_000769 ;   NM_000770 ;   NM_000771 ;   NM_000772 ;   NM_001024611 ;   NM_001128925 ;   NM_001145466 ;   NM_001145467 ;   NM_001198853 ;   NM_001198854 ;   NM_001198855 ;   NM_001257197 ;   NM_001257198 ;   NM_003590 ;   NM_147130 ;   NM_182828 ;  

Predicted by TAPIR

NM_000769 ;   NM_000770 ;   NM_000772 ;   NM_001024611 ;   NM_001099952 ;   NM_001128925 ;   NM_001168272 ;   NM_001198853 ;   NM_001198855 ;   NM_002222 ;   NM_017659 ;   NM_182828 ;