The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR26
  5. sor-miR26ah

Accession: B63002002

Entry

ID: sor-miR26ah
Alias: F2227.M000042.A11
Sequence: UCCAAGUAAUCCAGGAUAGGCU
Description: mir-26 microRNA precursor family predicted,partially
Species: 豨莶  Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)  
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR26ah; bca-miR26ah; cit-miR26ai; cmd-miR26ah; hcr-miR26ag; poe-miR26ah; sor-miR26ah; tch-miR26e;

Rfam Alignments

>> mir-26  mir-26 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !     0.004   18.4   0.0  cm       11       30 .~           3          22 + .~ 1.00    3' 0.45
                         ????????? ?????????        NC
                         <<<<<<<<<-<<<<<<<<<_~~~~~~ CS
               mir-26 11 CAAGUAAucCAGgAuAGGCU*[35]> 65
                         CAAGUAAUCCAGGAUAGGCU
           tch-miR26e  3 CAAGUAAUCCAGGAUAGGCU*[ 0]> 22
                         ********************...... PP

Targets

Predicted by TargetFinder

NM_001037324 ;   NM_001100120 ;   NM_001100121 ;   NM_007011 ;   NM_014693 ;   NM_152924 ;  

Predicted by TAPIR

NM_001034915 ;   NM_001037324 ;   NM_001100120 ;   NM_001100121 ;   NM_001122825 ;   NM_001122826 ;   NM_001122827 ;   NM_014693 ;   NM_017697 ;