The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR26
  5. sor-miR26an

Accession: B63002025

Entry

ID: sor-miR26an
Alias: F2227.M000089.A11
Sequence: UUCAAGUAAUCCACGAUAGGCU
Description: mir-26 microRNA precursor family predicted,partially
Species: 豨莶  Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)  
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR26as; cmd-miR26an; sor-miR26an;

Rfam Alignments

>> mir-26  mir-26 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0092   17.2   0.0  cm        9       30 ~~           1          22 + ~~ 1.00 5'&3' 0.41
                                ????????? ?????????        NC
                         ~~~~~::<<<<<<<<<-<<<<<<<<<_~~~~~~ CS
               mir-26  1 <[8]*UUCAAGUAAucCAGgAuAGGCU*[44]> 74
                              UUCAAGUAAUCCA GAUAGGCU
          sor-miR26an  1 <[0]*UUCAAGUAAUCCACGAUAGGCU*[ 0]> 22
                         .....**********************...... PP

Targets

Predicted by TargetFinder

NM_001351397 ;   NM_001351398 ;   NM_001351399 ;   NM_001351400 ;   NM_001351401 ;   NM_001351402 ;   NM_001351403 ;   NM_001351404 ;   NM_001351405 ;   NM_001351406 ;   NM_001351407 ;   NM_001351408 ;   NM_001351409 ;   NM_001351410 ;   NM_001351411 ;   NM_001351412 ;   NM_001351413 ;   NM_001351414 ;   NM_001351415 ;   NM_001351416 ;   NM_001351417 ;   NM_001351418 ;   NM_001351419 ;   NM_001351420 ;   NM_001401 ;   NM_015204 ;   NM_057159 ;  

Predicted by TAPIR

NM_013339 ;   NM_138390 ;