The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR24
  5. sor-miR24ba

Accession: B63009553

Entry

ID: sor-miR24ba
Alias: F2534.N001320.A11*
Sequence: UGGCUCAGUUCAGCAGGAACAGG
Description: mir-24 microRNA precursor family predicted,partially
Species: 豨莶  Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)  
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bswzz-miR24d; acr-miR24e; cci-miR24g; cit-miR24bh; cmd-miR24o; cof-miR24g; csp-miR24f; fmu-miR24f; hcr-miR24p; ljp-miR24h; poe-miR24q; sdf-miR24e; sor-miR24ba; zof-miR24k;

Rfam Alignments

>> mir-24  mir-24 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !     2e-05   25.6   0.0  cm       44       66 ~~           1          23 + ~~ 1.00 5'&3' 0.57
                       ????????? ???    ??      NC
             ~~~~~~____>>>>>>>>>->>>---->>~~~~~ CS
   mir-24  1 <[43]*UGGCUCAGuUCAGCAGGAACAGG*[2]> 68
                   UGGCUCAGUUCAGCAGGAACAGG
zof-miR24k  1 <[ 0]*UGGCUCAGUUCAGCAGGAACAGG*[0]> 23
             ......***********************..... PP

Targets

Predicted by TargetFinder

NM_001144026 ;   NM_001144027 ;   NM_001144028 ;   NM_001322117 ;   NM_001322118 ;   NM_001322119 ;   NM_014434 ;   NR_036109 ;   NR_134503 ;  

Predicted by TAPIR

NM_001144026 ;   NM_001144028 ;   NM_014434 ;