The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR24
  5. sor-miR24ax

Accession: B63009550

Entry

ID: sor-miR24ax
Alias: F2534.N001305.A25*
Sequence: UGGCUCAGUUCAGCAGGAACAGA
Description: mir-24 microRNA precursor family predicted,partially
Species: 豨莶  Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)  
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR24j; asc-miR24g; bca-miR24f; bch-miR24h; cci-miR24d; cfe-miR24f; cit-miR24bd; cmd-miR24l; fsu-miR24; hcr-miR24n; mpu-miR24b; poe-miR24n; pvl-miR24c; sbc-miR24b; sor-miR24ax; vph-miR24h; zof-miR24g;

Rfam Alignments

>> mir-24  mir-24 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   5.4e-05   24.2   0.0  cm       44       65 ~.           1          22 + ~. 1.00    5' 0.55
                                                                   ????????? ???    ? NC
                                                         ~~~~~~____>>>>>>>>>->>>----> CS
                                               mir-24  4 <[40]*UGGCUCAGuUCAGCAGGAACAG 65
                                                               UGGCUCAGUUCAGCAGGAACAG
                                           zof-miR24g  1 <[ 0]*UGGCUCAGUUCAGCAGGAACAG 22
                                                         ......********************** PP

Targets

Predicted by TargetFinder

NM_001322117 ;   NM_001322118 ;   NM_001322119 ;   NR_036109 ;   NR_134503 ;  

Predicted by TAPIR

NM_001322117 ;   NM_001322118 ;   NM_001322119 ;   NR_036109 ;   NR_134503 ;