The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR24
  5. sor-miR24aq

Accession: B63009533

Entry

ID: sor-miR24aq
Alias: F2534.L000753.A25*
Sequence: UGGCUCAGUUCAGCAGGAACG
Description: mir-24 microRNA precursor family predicted,partially
Species: 豨莶  Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)  
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR24f; cit-miR24ar; poe-miR24j; sor-miR24aq; tki-miR24c; zof-miR24d;

Rfam Alignments

>> mir-24  mir-24 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00042   21.3   0.0  cm       44       63 ~.           1          20 + ~. 1.00    5' 0.55
                                                                     ????????? ???    NC
                                                           ~~~~~~____>>>>>>>>>->>>--- CS
                                                 mir-24  9 <[35]*UGGCUCAGuUCAGCAGGAAC 63
                                                                 UGGCUCAGUUCAGCAGGAAC
                                             zof-miR24d  1 <[ 0]*UGGCUCAGUUCAGCAGGAAC 20
                                                           ......******************** PP

Targets

Predicted by TargetFinder

NM_001256071 ;   NM_001281834 ;   NM_001281835 ;   NM_001281836 ;   NM_001281837 ;   NM_001281838 ;   NM_001281853 ;   NM_001284511 ;   NM_001284512 ;   NM_001297698 ;   NM_001301188 ;   NM_001301190 ;   NM_001301193 ;   NM_001301196 ;   NM_001301201 ;   NM_001321784 ;   NM_001322117 ;   NM_001322118 ;   NM_001322119 ;   NM_001324118 ;   NM_001355281 ;   NM_002862 ;   NM_014611 ;   NM_021158 ;   NM_024865 ;   NM_145278 ;   NM_152341 ;   NR_036109 ;   NR_134503 ;  

Predicted by TAPIR

NM_001005180 ;   NM_001178137 ;   NM_001199563 ;   NM_001256071 ;   NM_001281834 ;   NM_001281835 ;   NM_001281836 ;   NM_001281837 ;   NM_001281838 ;   NM_001281853 ;   NM_001284511 ;   NM_001284512 ;   NM_001297698 ;   NM_001322117 ;   NM_001322118 ;   NM_001322119 ;   NM_001324118 ;   NM_001355281 ;   NM_002862 ;   NM_007073 ;   NM_014912 ;   NM_024865 ;   NM_145278 ;   NM_147147 ;   NM_152341 ;   NR_036109 ;