Accession: B62919600

Entry
Homologs
Rfam Alignments
Targets

Entry

ID: sor-miR1ba
Alias: F574.O000274.A11
Sequence: UGGAAUGUAAAGAAGUAUGUAUGU
Description: mir-1 microRNA precursor family predicted,partially
Species: 豨莶 Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

sor-miR1ba; zof-miR1p;

Rfam Alignments

>> mir-1  mir-1 microRNA precursor family
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0041   20.8   0.0  cm       49       70 ~.           1          22 + ~. 1.00    5' 0.27
                               ??? ?????????????????? NC
                         ~~~~~~>>>->>>>>>>>>>>>>>>>>> CS
                mir-1  8 <[41]*UGGAAUgUAAaGAAGuAUGuag 70
                               UGGAAUGUAAAGAAGUAUGUA
            zof-miR1p  1 <[ 0]*UGGAAUGUAAAGAAGUAUGUAU 22
                         ......********************** PP

Targets

Predicted by TargetFinder

Predicted by TAPIR