Entry

ID: sor-miR133ah
Alias: F1236.L000008.A11*
Sequence: UUUGGUCCCCUUCAACCAGCU
Description: mir-133 microRNA precursor family predicted,partially
Species: 豨莶 Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

asc-miR133b; bpi-miR133ah; cci-miR133a; cfe-miR133c; cit-miR133ah; cmd-miR133ae; cmi-miR133f; csu-miR133a; fsu-miR133a; hcr-miR133aj; ljp-miR133a; poe-miR133ae; pvl-miR133c; sor-miR133ah; tch-miR133ad; zof-miR133d;

Rfam Alignments

>> mir-133  mir-133 microRNA precursor family
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00011   23.2   0.0  cm       51       71 ~~           1          21 + ~~ 1.00 5'&3' 0.52
                   ??????     ?? ???????       NC
             ~~~~~~>>>>>>----->>->>>>>>>~~~~~~ CS
  mir-133  1 <[50]*UuUGGUCCCCUUCAACCAGCu*[16]> 87
                   UUUGGUCCCCUUCAACCAGCU
zof-miR133d  1 <[ 0]*UUUGGUCCCCUUCAACCAGCU*[ 0]> 21
             ......*********************...... PP

Targets

Predicted by TargetFinder

NM_000533 ; NM_001128834 ; NM_001135146 ; NM_001135147 ; NM_001135148 ; NM_001145153 ; NM_001145368 ; NM_001145369 ; NM_001145370 ; NM_001145371 ; NM_001145372 ; NM_001297669 ; NM_001297670 ; NM_001305004 ; NM_001308394 ; NM_001364885 ; NM_002829 ; NM_002830 ; NM_003278 ; NM_022154 ; NM_022744 ; NM_025081 ; NM_144649 ; NM_199478 ; NR_026918 ;

Predicted by TAPIR

NM_000533 ; NM_001128834 ; NM_001145153 ; NM_001145369 ; NM_001145370 ; NM_001145372 ; NM_001297669 ; NM_001305004 ; NM_001308394 ; NM_002830 ; NM_015946 ; NM_018397 ; NM_144649 ; NM_199478 ; NR_026918 ;

The Bencao (Herbal) Database（本草数据库）

Accession: B62971101