The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR10
  5. sor-miR10bb

Accession: B63126710

Entry

ID: sor-miR10bb
Alias: F26811.M000008.A25*
Sequence: UACCCUGUAGAACCGAAUUUGU
Description: mir-10 microRNA precursor family predicted,partially
Species: 豨莶  Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)  
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR10ar; asc-miR10i; bca-miR10o; bpi-miR10f; cde-miR10a; cfe-miR10ap; cit-miR10bf; cmd-miR10aq; cmi-miR10a; cof-miR10h; csu-miR10f; esn-miR10k; fmu-miR10i; fsu-miR10k; gel-miR10j; hcr-miR10p; lgr-miR10b; ljn-miR10g; llu-miR10g; pfr-miR10f; poe-miR10az; ppr-miR10n; pvl-miR10m; sar-miR10e; sch-miR10f; sdi-miR10b; sgi-miR10n; sor-miR10bb; tch-miR10g; tki-miR10r; tmo-miR10h; zof-miR10k;

Rfam Alignments

>> mir-10  mir-10 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00083   20.4   0.0  cm        8       29 ~~           1          22 + ~~ 1.00 5'&3' 0.41
                                                                ???   ??????????????       NC
                                                         ~~~~~--<<<---<<<<<<<<<<<<<<~~~~~~ CS
                                               mir-10  1 <[7]*UACCCUGUAGAucCGAacuUGU*[46]> 75
                                                              UACCCUGUAGA CCGAA UUGU
                                           zof-miR10k  1 <[0]*UACCCUGUAGAACCGAAUUUGU*[ 0]> 22
                                                         .....**********************...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR