The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR103
  5. sor-miR103i

Accession: B63105311

Entry

ID: sor-miR103i
Alias: F16365.O000075.A11
Sequence: AGCAGCAUUGUACAGGGCUAUGAU
Description: mir-103/107 microRNA precursor predicted,partially
Species: 豨莶  Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)  
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR103d; Bswzz-miR103b; asc-miR103c; bca-miR103b; bch-miR103d; bhi-miR103e; bpi-miR103b; cas-miR103b; cci-miR103c; cfe-miR103c; cit-miR103j; fsu-miR103b; hcr-miR103f; ljn-miR103b; mpu-miR103b; poe-miR103i; pvl-miR103c; sor-miR103i; vph-miR103d;

Rfam Alignments

>> mir-103  mir-103/107 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0016   21.0   0.0  cm       48       70 ~.           1          23 + ~. 1.00    5' 0.48
                               ???????????    ??   ?? NC
                        ~~~~~~_>>>>>>>>>>>---->>--->> CS
             mir-103  9 <[39]*AGCAgCAuUGUACAGGGCUAUgA 70
                              AGCAGCAUUGUACAGGGCUAUGA
         vph-miR103d  1 <[ 0]*AGCAGCAUUGUACAGGGCUAUGA 23
                        ......*********************** PP

Targets

Predicted by TargetFinder

NM_002180 ;  

Predicted by TAPIR

NM_002180 ;   NR_031721 ;   NR_031722 ;