The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR181
  5. sor-miR181j

Accession: B63186083

Entry

ID: sor-miR181j
Alias: F121557.N000062.A11
Sequence: AACAUUCAACGCUGUCGGUGAGA
Description: mir-181 microRNA precursor predicted,partially
Species: 豨莶  Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)  
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR181g; Bswzz-miR181c; asc-miR181b; bch-miR181d; bhi-miR181c; cfe-miR181j; cit-miR181n; cmd-miR181f; fsu-miR181d; hcr-miR181g; ljo-miR181d; poe-miR181g; ppr-miR181d; pvl-miR181e; sch-miR181d; sdi-miR181b; sgi-miR181d; sor-miR181j; tki-miR181d;

Rfam Alignments

>> mir-181  mir-181 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0039   19.5   0.0  cm        9       31 ~~           1          23 + ~~ 1.00 5'&3' 0.48
                               ?? ?????   ??????? ??       NC
                        ~~~~~--<<-<<<<<---<<<<<<<-<<~~~~~~ CS
             mir-181  1 <[8]*AACAUUCAACGCUGUCGgUGAGU*[45]> 76
                             AACAUUCAACGCUGUCGGUGAG
         tki-miR181d  1 <[0]*AACAUUCAACGCUGUCGGUGAGA*[ 0]> 23
                        .....***********************...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR