The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR146
  5. sor-miR146d

Accession: B63078362

Entry

ID: sor-miR146d
Alias: F9241.M000024.A25
Sequence: UGAGAACUGAAUUCCAUGGGUC
Description: microRNA mir-146 predicted
Species: 豨莶  Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)  
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR146g; asc-miR146b; bca-miR146d; cci-miR146a; cfe-miR146g; cit-miR146f; cmd-miR146f; cof-miR146b; gel-miR146a; pfr-miR146b; poe-miR146e; ppr-miR146d; sor-miR146d; tki-miR146b;

Rfam Alignments

>> mir-146  microRNA mir-146
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0019   20.7   0.0  cm       16       37 ~~           1          22 + ~~ 1.00 5'&3' 0.45
                                                                   ????????       ????        NC
                                                           ~~~~~~--<<<<<<<<-------<<<<_~~~~~~ CS
                                                mir-146  1 <[15]*UGAGAACUGAAUUCCAUgGgcU*[53]> 90
                                                                 UGAGAACUGAAUUCCAUGGG
                                            tki-miR146b  1 <[ 0]*UGAGAACUGAAUUCCAUGGGUC*[ 0]> 22
                                                           ......**********************...... PP

Targets

Predicted by TargetFinder

NM_001286526 ;  

Predicted by TAPIR

NM_032167 ;