Accession: B63159185

Entry
Homologs
Rfam Alignments
Targets

Entry

ID: sor-miR146o
Alias: F57607.O000004.A11
Sequence: UGAGAACUGAAUUCCAUGGGUUUU
Description: microRNA mir-146 predicted
Species: 豨莶 Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR146r; cfe-miR146s; cit-miR146p; cmd-miR146r; pfr-miR146h; sgi-miR146g; sor-miR146o; tki-miR146i;

Rfam Alignments

>> mir-146  microRNA mir-146
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00081   22.1   0.0  cm       16       39 ~~           1          24 + ~~ 0.99 5'&3' 0.38
                                 ????????       ????          NC
                         ~~~~~~--<<<<<<<<-------<<<<___~~~~~~ CS
              mir-146  1 <[15]*UGAGAACUGAAUUCCAUgGgcUGU*[51]> 90
                               UGAGAACUGAAUUCCAUGGG U U
          tki-miR146i  1 <[ 0]*UGAGAACUGAAUUCCAUGGGUUUU*[ 0]> 24
                         ......***********************9...... PP

Targets

Predicted by TargetFinder

NM_001354045 ;

Predicted by TAPIR