The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR24
  5. ljp-miR24g

Accession: B42851417

Entry

ID: ljp-miR24g
Alias: F2534.N001319.A11*
Sequence: UGGCUCAGUUCAGCAGGAACAGC
Description: mir-24 microRNA precursor family predicted,partially
Species: 石松  Species latin name: Lycopodium japonicum
TCM Name: Shenjincao(伸筋草)  
TCM Resource (Sample number): 伸筋草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR24l; asc-miR24i; bca-miR24h; cci-miR24f; cfe-miR24h; cit-miR24bg; cmd-miR24n; cof-miR24f; csu-miR24; ljp-miR24g; poe-miR24p; sor-miR24az; zof-miR24j;

Rfam Alignments

>> mir-24  mir-24 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   5.4e-05   24.2   0.0  cm       44       65 ~.           1          22 + ~. 1.00    5' 0.55
                                  ????????? ???    ? NC
                        ~~~~~~____>>>>>>>>>->>>----> CS
              mir-24  4 <[40]*UGGCUCAGuUCAGCAGGAACAG 65
                              UGGCUCAGUUCAGCAGGAACAG
          zof-miR24j  1 <[ 0]*UGGCUCAGUUCAGCAGGAACAG 22
                        ......********************** PP

Targets

Predicted by TargetFinder

NM_001322117 ;   NM_001322118 ;   NM_001322119 ;   NM_014611 ;   NR_036109 ;  

Predicted by TAPIR

NM_001199563 ;   NM_001322117 ;   NM_001322118 ;   NM_001322119 ;   NM_007073 ;   NM_014611 ;   NM_147147 ;   NR_036109 ;   NR_158224 ;