The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR92
  5. ljo-miR92b

Accession: B42552167

Entry

ID: ljo-miR92b
Alias: F11410.N000049.A25
Sequence: UAUUGCACUUGUCCCGGCCUGUA
Description: mir-92 microRNA precursor family predicted,partially
Species: 昆布  Species latin name: Laminaria japonica
TCM Name:
TCM Resource (Sample number): 昆布(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR92g; Bswzz-miR92b; acr-miR92b; asc-miR92b; bca-miR92c; bhi-miR92c; cas-miR92b; cba-miR92b; cci-miR92c; cfe-miR92c; cit-miR92ah; cmd-miR92d; cso-miR92b; csp-miR92a; csu-miR92c; ehu-miR92b; esn-miR92c; fmu-miR92c; fsu-miR92b; hcr-miR92c; lgr-miR92b; ljn-miR92b; ljo-miR92b; ljp-miR92b; llu-miR92b; mpu-miR92b; pcn-miR92b; pfr-miR92b; poe-miR92d; ppr-miR92b; pvl-miR92b; sar-miR92b; sbc-miR92b; sdi-miR92c; sgi-miR92b; sor-miR92e; tch-miR92c; tki-miR92b; zof-miR92c;

Rfam Alignments

>> mir-92  mir-92 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00074   19.9   0.0  cm       50       71 ~.           1          22 + ~. 1.00    5' 0.55
                                                                  ????????? ????? ?????? NC
                                                            ~~~~~~>>>>>>>>>->>>>>->>>>>> CS
                                                  mir-92  9 <[41]*uAuUGCACuUgUCCCGGCCugu 71
                                                                  UAUUGCACUUGUCCCGGCCUGU
                                              zof-miR92c  1 <[ 0]*UAUUGCACUUGUCCCGGCCUGU 22
                                                            ......********************** PP

Targets

Predicted by TargetFinder


Predicted by TAPIR