The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR451
  5. ljo-miR451c

Accession: B42563169

Entry

ID: ljo-miR451c
Alias: F18218.N000034.A25
Sequence: AAACCGUUACCAUUACUGAGUUU
Description: microRNA mir-451 predicted
Species: 昆布  Species latin name: Laminaria japonica
TCM Name:
TCM Resource (Sample number): 昆布(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR451c; asc-miR451c; bca-miR451c; bch-miR451c; bhi-miR451c; bpi-miR451c; cba-miR451c; cfe-miR451c; cit-miR451c; cmd-miR451c; cso-miR451d; fmu-miR451c; gel-miR451c; gpe-miR451c; hcr-miR451c; lgr-miR451c; ljo-miR451c; mal-miR451c; mpu-miR451c; pfr-miR451c; poe-miR451c; pvl-miR451c; rcr-miR451c; sar-miR451b; sbc-miR451c; sch-miR451c; sgi-miR451c; smi-miR451c; sor-miR451d; tki-miR451c; vph-miR451c;

Rfam Alignments

>> mir-451  microRNA mir-451
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !     0.001   22.5   0.0  cm       17       39 ~~           1          23 + ~~ 1.00 5'&3' 0.35
                                                                   ????????????????             NC
                                                            ~~~~~~-<<<<<<<<<<<<<<<<<____>~~~~~~ CS
                                                 mir-451  1 <[16]*AAACCgUUACCAUUACUgAGUUc*[33]> 72
                                                                  AAACCGUUACCAUUACU:AGUU:
                                             vph-miR451c  1 <[ 0]*AAACCGUUACCAUUACUGAGUUU*[ 0]> 23
                                                            ......***********************...... PP

Targets

Predicted by TargetFinder

NR_039876 ;  

Predicted by TAPIR

NR_029970 ;   NR_039876 ;