The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR92
  5. ljc-miR92a

Accession: B41408885

Entry

ID: ljc-miR92a
Alias: F11410.M000018.A25
Sequence: UAUUGCACUCGUCCCGGCCUGU
Description: mir-92 microRNA precursor family predicted,partially
Species: 海金沙  Species latin name: Lygodium japonicum
TCM Name: Haijinsha(海金沙)  
TCM Resource (Sample number): 海金沙(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR92c; act-miR92; aha-miR92; cit-miR92ac; csu-miR92a; efo-miR92; hcr-miR92a; ljc-miR92a;

Rfam Alignments

>> mir-92  mir-92 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0085   16.6   0.0  cm       50       71 ~~           1          22 + ~~ 1.00 5'&3' 0.59
                                                                ????????? ????? ??????      NC
                                                          ~~~~~~>>>>>>>>>->>>>>->>>>>>~~~~~ CS
                                                mir-92  1 <[49]*uAuUGCACuUgUCCCGGCCugu*[9]> 80
                                                                UAUUGCACU GUCCCGGCCUGU
                                            ljc-miR92a  1 <[ 0]*UAUUGCACUCGUCCCGGCCUGU*[0]> 22
                                                          ......**********************..... PP

Targets

Predicted by TargetFinder

NR_135541 ;   NR_135542 ;   NR_135543 ;   NR_135544 ;  

Predicted by TAPIR

NR_135541 ;   NR_135542 ;   NR_135543 ;   NR_135544 ;