Entry

ID: ljc-miR166m
Alias: F1829.L000007.A29
Sequence: UCGGACCAGGCUUCAUUCCCG
Description: MIR166 putative
Species: 海金沙 Species latin name: Lygodium japonicum
TCM Name: Haijinsha(海金沙)
TCM Resource (Sample number): 海金沙(1)
Predicted by Mirnovo: -
Evidence support: Mirbase|infernal
Experimental status: Not yet

Homologs

miRBase Homologs

cpa-miR166d; gma-miR166j-3p;

Bencao Homologs

Bjl-miR166m; Bsr-miR166p; apl-miR166q; bhi-miR166h; car-miR166r; cba-miR166d; cci-miR166g; cco-miR166az; ccs-miR166av; cit-miR166o; cmd-miR166o; cmj-miR166k; cri-miR166e; csu-miR166q; dst-miR166r; eja-miR166k; epr-miR166ba; est-miR166o; gbi-miR166ba; gsi-miR166m; hmu-miR166p; hof-miR166o; ljc-miR166m; llc-miR166q; llu-miR166h; lpu-miR166ao; mal-miR166p; mca-miR166aw; nnu-miR166au; nte-miR166o; pav-miR166k; pcl-miR166o; pfr-miR166be; por-miR166r; ptn-miR166i; sor-miR166n; ssu-miR166i; vum-miR166i;

Rfam Alignments

>> mir-166  mir-166 microRNA precursor
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00014   22.7   0.0  cm      101      120 ~.           1          20 + ~. 1.00    5' 0.60
                                ???  ??????  ??????? NC
                          ~~~~~~>>>-->>>>>>-->>>>>>> CS
              mir-166   7 <[94]*UCGGACCAGGCUUCAUUCCc 120
                                UCGGACCAGGCUUCAUUCCC
          vum-miR166i   1 <[ 0]*UCGGACCAGGCUUCAUUCCC 20
                          ......******************** PP

Targets

Predicted by TargetFinder

NM_001358263 ; NM_015221 ;

Predicted by TAPIR