The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR146
  5. lba-miR146

Accession: B39278981

Entry

ID: lba-miR146
Alias: F9241.M000021.A25
Sequence: UGAGAACUGAAUUCCAUAGGCU
Description: microRNA mir-146 predicted
Species: 宁夏枸杞  Species latin name: Lycium barbarum
TCM Name: Gouqizi(枸杞子)  
TCM Resource (Sample number): 枸杞子(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR146d; bca-miR146c; bch-miR146a; bhi-miR146b; cas-miR146b; cba-miR146a; cfe-miR146d; cit-miR146d; cmd-miR146c; cof-miR146a; hcr-miR146b; lba-miR146; poe-miR146c; ppr-miR146b; sgi-miR146b; sor-miR146b; tch-miR146a; zof-miR146b;

Rfam Alignments

>> mir-146  microRNA mir-146
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00061   22.4   0.0  cm       16       37 ~~           1          22 + ~~ 1.00 5'&3' 0.41
                                                                   ????????       ????        NC
                                                           ~~~~~~--<<<<<<<<-------<<<<_~~~~~~ CS
                                                mir-146  1 <[15]*UGAGAACUGAAUUCCAUgGgcU*[53]> 90
                                                                 UGAGAACUGAAUUCCAU GGCU
                                            zof-miR146b  1 <[ 0]*UGAGAACUGAAUUCCAUAGGCU*[ 0]> 22
                                                           ......**********************...... PP

Targets

Predicted by TargetFinder

NM_207363 ;   NR_038216 ;   NR_038217 ;   NR_038218 ;   NR_038219 ;  

Predicted by TAPIR