Entry

ID: hcr-miR30aa
Alias: F3769.J000006.A11
Sequence: UGUAAACAUCCCCGACUGG
Description: mir-30 microRNA precursor predicted,partially
Species: 蕺菜 Species latin name: Houttuynia cordata
TCM Name: Yuxingcao(鱼腥草)
TCM Resource (Sample number): 鱼腥草(2)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR30ab; bca-miR30aa; bch-miR30aa; cfe-miR30aa; cit-miR30ad; cmd-miR30ab; cof-miR30a; csu-miR30a; hcr-miR30aa; poe-miR30aa; ppr-miR30aa; sor-miR30ae; tch-miR30aa; tki-miR30aa; zof-miR30aa;

Rfam Alignments

>> mir-30  mir-30 microRNA precursor
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0045   20.7   0.0  cm        1       19 [~           1          19 + [~ 1.00    3' 0.53
              ??????????  ??????       NC
             :<<<<<<<<<<--<<<<<<~~~~~~ CS
   mir-30  1 UGuAAACAUCcUcGACuGg*[41]> 60
             UGUAAACAUCC+CGACUGG
zof-miR30aa  1 UGUAAACAUCCCCGACUGG*[ 0]> 19
             *******************...... PP

Targets

Predicted by TargetFinder

NM_000332 ; NM_001077261 ; NM_001080496 ; NM_001128164 ; NM_001144937 ; NM_001206654 ; NM_001318374 ; NM_001357857 ; NM_001369201 ; NM_006312 ; NM_006805 ; NM_020632 ; NM_032048 ; NM_130840 ; NM_130841 ; NR_033342 ; NR_034130 ; NR_131168 ;

Predicted by TAPIR

NM_000332 ; NM_001080496 ; NM_001128164 ; NM_001318374 ; NM_001357857 ; NM_001369201 ; NM_003809 ; NM_006805 ; NM_130840 ; NM_130841 ; NM_172089 ; NR_033342 ; NR_037146 ;

The Bencao (Herbal) Database（本草数据库）

Accession: B35807388