The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR27
  5. hcr-miR27bb

Accession: B35939642

Entry

ID: hcr-miR27bb
Alias: F99451.N000011.A11*
Sequence: UUCACAGUGGCUAAGUUCCGAAA
Description: microRNA mir-27 predicted
Species: 蕺菜  Species latin name: Houttuynia cordata
TCM Name: Yuxingcao(鱼腥草)  
TCM Resource (Sample number): 鱼腥草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR27t; cfe-miR27r; hcr-miR27bb; poe-miR27bj;

Rfam Alignments

>> mir-27  microRNA mir-27
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0016   20.3   0.0  cm       56       75 ~.           1          20 + ~. 1.00    5' 0.50
                               ?????  ???????????   NC
                         ~~~~~~>>>>>-->>>>>>>>>>>:: CS
               mir-27 15 <[41]*uUCACAGuGGCUAAGuuCuG 75
                               UUCACAGUGGCUAAGUUC+G
          poe-miR27bj  1 <[ 0]*UUCACAGUGGCUAAGUUCCG 20
                         ......******************** PP

Targets

Predicted by TargetFinder

NM_000489 ;   NM_138270 ;  

Predicted by TAPIR

NM_021916 ;