The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR10
  5. hcr-miR10m

Accession: B35861915

Entry

ID: hcr-miR10m
Alias: F10989.N000100.A11
Sequence: AACCCGUAGAUCCGAACUUGUGA
Description: mir-10 microRNA precursor family predicted,partially
Species: 蕺菜  Species latin name: Houttuynia cordata
TCM Name: Yuxingcao(鱼腥草)  
TCM Resource (Sample number): 鱼腥草(2)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR10ao; asc-miR10h; bca-miR10l; cci-miR10h; cfe-miR10am; cit-miR10aw; cmd-miR10an; csu-miR10e; fmu-miR10h; fsu-miR10j; gel-miR10i; hcr-miR10m; ljo-miR10f; ljp-miR10g; mal-miR10d; poe-miR10ar; ppr-miR10m; pvl-miR10l; sdf-miR10g; sgi-miR10m; sor-miR10au; tki-miR10o; tmo-miR10g; zof-miR10j;

Rfam Alignments

>> mir-10  mir-10 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0018   19.4   0.0  cm        8       31 ~~           1          23 + ~~ 1.00 5'&3' 0.48
                               ???   ???????????????        NC
                        ~~~~~--<<<---<<<<<<<<<<<<<<<_~~~~~~ CS
              mir-10  1 <[7]*UACCCUGUAGAucCGAacuUGUGu*[44]> 75
                             +ACCC GUAGAUCCGAACUUGUG
          zof-miR10j  1 <[0]*AACCC-GUAGAUCCGAACUUGUGA*[ 0]> 23
                        .....*****.******************...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR