The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR10
  5. hcr-miR10l

Accession: B35861914

Entry

ID: hcr-miR10l
Alias: F10989.N000097.A25
Sequence: AACCCGUAGAUCCGAUCUUGUGU
Description: mir-10 microRNA precursor family predicted,partially
Species: 蕺菜  Species latin name: Houttuynia cordata
TCM Name: Yuxingcao(鱼腥草)  
TCM Resource (Sample number): 鱼腥草(2)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR10an; Bswzz-miR10e; asc-miR10g; bca-miR10k; bch-miR10i; bhi-miR10f; cas-miR10e; cci-miR10g; cfe-miR10al; cit-miR10au; cmd-miR10am; fmu-miR10g; fsu-miR10i; hcr-miR10l; ljo-miR10e; ljp-miR10f; llu-miR10f; poe-miR10aq; ppr-miR10l; psu-miR10d; pvl-miR10k; sch-miR10e; sdf-miR10f; sgi-miR10l; sor-miR10as; tki-miR10n; vph-miR10g; zof-miR10i;

Rfam Alignments

>> mir-10  mir-10 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00088   20.3   0.0  cm        8       31 ~~           1          23 + ~~ 1.00 5'&3' 0.48
                                                                  ???   ???????????????        NC
                                                           ~~~~~--<<<---<<<<<<<<<<<<<<<_~~~~~~ CS
                                                 mir-10  1 <[7]*UACCCUGUAGAucCGAacuUGUGu*[44]> 75
                                                                +ACCC GUAGAUCCGA CUUGUGU
                                             zof-miR10i  1 <[0]*AACCC-GUAGAUCCGAUCUUGUGU*[ 0]> 23
                                                           .....*****.******************...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR