The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR319
  5. esn-miR319

Accession: B30120705

Entry

ID: esn-miR319
Alias: F424.L000009.A3D
Sequence: UGGACUGAAGGGAGCUCCUUC
Description: MIR319 putative
Species: 草麻黄  Species latin name: Ephedra sinica
TCM Name: Mahuang(麻黄)   Mahuanggen(麻黄根)  
TCM Resource (Sample number): 麻黄(1)
Predicted by Mirnovo: -
Evidence support: Mirbase|infernal
Experimental status: Not yet

Homologs

miRBase Homologs

gma-miR319q;

Bencao Homologs

Bswzz-miR319a; acn-miR319a; aha-miR319f; ala-miR319d; aof-miR319h; bca-miR319h; bhi-miR319b; bpi-miR319c; cco-miR319j; clo-miR319g; cma-miR319; cof-miR319e; csp-miR319b; dst-miR319f; esn-miR319; fmu-miR319b; fth-miR319; gma-miR319e; gsi-miR319b; gur-miR319; ini-miR319f; kga-miR319f; lcr-miR319b; lpu-miR319d; pgi-miR319; sgi-miR319; sjp-miR319; ssu-miR319g; tch-miR319b; twi-miR319f; vum-miR319b; zof-miR319g;

Rfam Alignments

>> MIR159  microRNA MIR159
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0023   18.7   0.0  cm      166      185 ~.           1          20 + ~. 1.00    5' 0.55
                                                                ???????  ????????    NC
                                                         ~~~~~~~>>>>>>>-->>>>>>>>::: CS
                                              MIR159  13 <[153]*UGGAcuGAAGGGAGCUCCuu 185
                                                                UGGACUGAAGGGAGCUCCUU
                                         zof-miR319g   1 <[  0]*UGGACUGAAGGGAGCUCCUU 20
                                                         .......******************** PP

Targets

Predicted by TargetFinder

NM_001144994 ;   NM_014906 ;   NM_020697 ;   NM_024923 ;   NM_201286 ;   NM_206839 ;   NR_048561 ;  

Predicted by TAPIR

NM_001276418 ;   NM_001319035 ;   NM_007110 ;   NM_014866 ;   NM_014906 ;   NM_024630 ;   NM_032352 ;   NM_201286 ;   NR_048561 ;   NR_158193 ;