The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR26
  5. ehu-miR26b

Accession: B28863482

Entry

ID: ehu-miR26b
Alias: F2227.M000036.A25
Sequence: UUCAAGUAAUCCAGGAUAGGCG
Description: mir-26 microRNA precursor family predicted,partially
Species: 地锦草  Species latin name: Euphorbia humifusa
TCM Name: Dijincao(地锦草)  
TCM Resource (Sample number): 地锦草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR26ab; Bswzz-miR26b; acr-miR26b; act-miR26a; asc-miR26b; bca-miR26ab; car-miR26b; cci-miR26b; cfe-miR26b; cit-miR26ac; clo-miR26; cmd-miR26ab; cmj-miR26b; cof-miR26b; csp-miR26b; csu-miR26b; ehu-miR26b; epr-miR26b; esn-miR26b; est-miR26a; fmu-miR26b; gel-miR26b; hcr-miR26ab; kga-miR26b; lch-miR26b; lcr-miR26a; ljc-miR26b; ljp-miR26b; lln-miR26a; llu-miR26b; mal-miR26b; nnu-miR26b; nte-miR26b; pfr-miR26b; poe-miR26ab; ppr-miR26b; sar-miR26a; sca-miR26a; sdf-miR26b; sdi-miR26b; sgi-miR26b; sln-miR26b; sor-miR26ab; tfa-miR26b; tki-miR26b; zof-miR26b;

Rfam Alignments

>> mir-26  mir-26 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0065   17.7   0.0  cm        9       30 ~~           1          22 + ~~ 0.99 5'&3' 0.45
                                                                ????????? ?????????        NC
                                                         ~~~~~::<<<<<<<<<-<<<<<<<<<_~~~~~~ CS
                                               mir-26  1 <[8]*UUCAAGUAAucCAGgAuAGGCU*[44]> 74
                                                              UUCAAGUAAUCCAGGAUAGGC
                                           zof-miR26b  1 <[0]*UUCAAGUAAUCCAGGAUAGGCG*[ 0]> 22
                                                         .....*********************8...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR