The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR30
  5. gel-miR30g

Accession: B33459739

Entry

ID: gel-miR30g
Alias: F3769.O000201.A11
Sequence: UGUAAACAUCCCCGACUGGAAGCC
Description: mir-30 microRNA precursor predicted,partially
Species: 天麻  Species latin name: Gastrodia elata
TCM Name: Tianma(天麻)  
TCM Resource (Sample number): 天麻(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR30av; acr-miR30j; asc-miR30an; bca-miR30ai; bhi-miR30ag; cci-miR30al; cfe-miR30an; cit-miR30cv; cmd-miR30bc; cof-miR30k; csp-miR30j; epr-miR30i; gel-miR30g; hof-miR30e; ljp-miR30aj; llu-miR30g; mal-miR30f; nte-miR30f; pfr-miR30g; poe-miR30bm; ppr-miR30ak; sch-miR30f; sdf-miR30l; sgi-miR30aj; sor-miR30cr; tch-miR30al; tki-miR30an; zof-miR30ao;

Rfam Alignments

>> mir-30  mir-30 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00016   26.4   0.0  cm        1       24 [~           1          24 + [~ 1.00    3' 0.54
                         ??????????  ???????????       NC
                        :<<<<<<<<<<--<<<<<<<<<<<~~~~~~ CS
              mir-30  1 UGuAAACAUCcUcGACuGgaAGCu*[36]> 60
                        UGUAAACAUCC+CGACUGGAAGC
         zof-miR30ao  1 UGUAAACAUCCCCGACUGGAAGCC*[ 0]> 24
                        ************************...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR