The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR23
  5. gel-miR23b

Accession: B33483797

Entry

ID: gel-miR23b
Alias: F19267.N000039.A11
Sequence: UCACAUUGCCAGGGAUUACCACU
Description: microRNA mir-23 predicted
Species: 天麻  Species latin name: Gastrodia elata
TCM Name: Tianma(天麻)  
TCM Resource (Sample number): 天麻(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR23e; Bswzz-miR23e; acr-miR23d; bca-miR23e; cba-miR23; cfe-miR23e; cit-miR23am; gel-miR23b; hcr-miR23h; poe-miR23ag; ppr-miR23c; sor-miR23ao; tch-miR23b; zof-miR23f;

Rfam Alignments

>> mir-23  microRNA mir-23
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0001   23.7   0.0  cm       48       70 ~~           1          23 + ~~ 1.00 5'&3' 0.48
                               ??      ?????????            NC
                         ~~~~~~>>------>>>>>>>>>::::::~~~~~ CS
               mir-23  1 <[47]*UCACAUUGCCAGGGAuUuCCAac*[5]> 75
                               UCACAUUGCCAGGGAUU+CCA++
           zof-miR23f  1 <[ 0]*UCACAUUGCCAGGGAUUACCACU*[0]> 23
                         ......***********************..... PP

Targets

Predicted by TargetFinder

NM_194286 ;  

Predicted by TAPIR

NM_001195150 ;