The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR26
  5. bpi-miR26b

Accession: B12179424

Entry

ID: bpi-miR26b
Alias: F2227.M000054.A11
Sequence: UUCAGGUAAUCCAGGAUAGGCU
Description: mir-26 microRNA precursor family predicted,partially
Species: 鬼针草  Species latin name: Bidens pilosa
TCM Name:
TCM Resource (Sample number): 鬼针草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR26aj; bca-miR26aj; bpi-miR26b; cfe-miR26h; cit-miR26ak; hcr-miR26ai; poe-miR26aj; pvl-miR26c; sor-miR26aj; zof-miR26g;

Rfam Alignments

>> mir-26  mir-26 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0019   19.5   0.0  cm        9       30 ~~           1          22 + ~~ 1.00 5'&3' 0.45
                                ????????? ?????????        NC
                         ~~~~~::<<<<<<<<<-<<<<<<<<<_~~~~~~ CS
               mir-26  1 <[8]*UUCAAGUAAucCAGgAuAGGCU*[44]> 74
                              UUCA GUAAUCCAGGAUAGGCU
           zof-miR26g  1 <[0]*UUCAGGUAAUCCAGGAUAGGCU*[ 0]> 22
                         .....**********************...... PP

Targets

Predicted by TargetFinder

NM_001321395 ;   NM_001371337 ;   NM_001371338 ;   NM_001371339 ;   NM_138635 ;   NM_152781 ;   NR_038385 ;   NR_135630 ;  

Predicted by TAPIR

NM_001321395 ;   NM_001371337 ;   NM_001371338 ;   NM_001371339 ;   NM_152781 ;   NR_038385 ;   NR_135630 ;