The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR8
  5. bca-miR8n

Accession: B09889730

Entry

ID: bca-miR8n
Alias: F65366.M000007.A11
Sequence: UAAUACUGCCGGGUAAUGAUGA
Description: mir-8/mir-141/mir-200 microRNA precursor family predicted,partially
Species: 乳香树  Species latin name: Boswellia carteri
TCM Name:
TCM Resource (Sample number): 乳香(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR8m; bca-miR8n; cmd-miR8n; hcr-miR8k; poe-miR8p;

Rfam Alignments

>> mir-8  mir-8/mir-141/mir-200 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0055   18.7   0.0  cm       48       69 ~~           1          22 + ~~ 1.00 5'&3' 0.41
                               ?????????   ???? ?????      NC
                         ~~~~~~>>>>>>>>>--->>>>->>>>>~~~~~ CS
                mir-8  1 <[47]*uAAcACUGcCUGGUAAuGAUGg*[7]> 76
                               UAA ACUGCC GGUAAUGAUG
            poe-miR8p  1 <[ 0]*UAAUACUGCCGGGUAAUGAUGA*[0]> 22
                         ......9*********************..... PP

Targets

Predicted by TargetFinder

NM_001128128 ;   NM_001174093 ;   NM_001174094 ;   NM_001174095 ;   NM_001174096 ;   NM_001323638 ;   NM_001323641 ;   NM_001323642 ;   NM_001323643 ;   NM_001323644 ;   NM_001323645 ;   NM_001323646 ;   NM_001323647 ;   NM_001323648 ;   NM_001323649 ;   NM_001323650 ;   NM_001323651 ;   NM_001323652 ;   NM_001323653 ;   NM_001323654 ;   NM_001323655 ;   NM_001323656 ;   NM_001323657 ;   NM_001323658 ;   NM_001323659 ;   NM_001323660 ;   NM_001323661 ;   NM_001323662 ;   NM_001323663 ;   NM_001323664 ;   NM_001323665 ;   NM_001323666 ;   NM_001323671 ;   NM_001323672 ;   NM_001323673 ;   NM_001323674 ;   NM_001323675 ;   NM_001323676 ;   NM_001323677 ;   NM_001323678 ;   NM_030751 ;   NM_031435 ;  

Predicted by TAPIR

NM_001128128 ;   NM_001136265 ;   NM_001174093 ;   NM_001174094 ;   NM_001174095 ;   NM_001174096 ;   NM_001323638 ;   NM_001323641 ;   NM_001323642 ;   NM_001323643 ;   NM_001323644 ;   NM_001323645 ;   NM_001323646 ;   NM_001323647 ;   NM_001323648 ;   NM_001323649 ;   NM_001323650 ;   NM_001323651 ;   NM_001323652 ;   NM_001323653 ;   NM_001323654 ;   NM_001323656 ;   NM_001323657 ;   NM_001323658 ;   NM_001323659 ;   NM_001323660 ;   NM_001323661 ;   NM_001323662 ;   NM_001323663 ;   NM_001323664 ;   NM_001323665 ;   NM_001323666 ;   NM_001323671 ;   NM_001323672 ;   NM_001323673 ;   NM_001323674 ;   NM_001323675 ;   NM_001323676 ;   NM_001323677 ;   NM_001323678 ;   NM_030751 ;   NM_031435 ;