The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR1
  5. bca-miR1m

Accession: B09785736

Entry

ID: bca-miR1m
Alias: F2044.N000015.A25
Sequence: UGGAAUGUAAGGAAGUGUGUGGU
Description: mir-1 microRNA precursor family predicted,partially
Species: 乳香树  Species latin name: Boswellia carteri
TCM Name:
TCM Resource (Sample number): 乳香(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bswzz-miR1k; bca-miR1m; cci-miR1l; cfe-miR1o; cit-miR1bj; cmd-miR1ax; cof-miR1k; csu-miR1k; fsu-miR1e; gel-miR1i; poe-miR1bc; ppr-miR1g; pvl-miR1k; sar-miR1k; sch-miR1m; sor-miR1bf; tch-miR1at; tki-miR1i; zof-miR1s;

Rfam Alignments

>> mir-1  mir-1 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0053   20.3   0.0  cm       49       71 ~~           1          23 + ~~ 1.00 5'&3' 0.43
                                                             ??? ??????????????????       NC
                                                       ~~~~~~>>>->>>>>>>>>>>>>>>>>>:~~~~~ CS
                                              mir-1  1 <[48]*UGGAAUgUAAaGAAGuAUGuagu*[6]> 77
                                                             UGGAAUGUAA GAAGU UGU GU
                                          zof-miR1s  1 <[ 0]*UGGAAUGUAAGGAAGUGUGUGGU*[0]> 23
                                                       ......***********************..... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR