The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR194
  5. csp-miR194c

Accession: B25473585

Entry

ID: csp-miR194c
Alias: F17409.O000018.A25
Sequence: UGUAACAGCAACUCCAUGUGGACU
Description: mir-194 microRNA precursor family predicted,partially
Species: 贴梗海棠  Species latin name: Chaenomeles speciosa
TCM Name: Mugua(木瓜)  
TCM Resource (Sample number): 木瓜(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

bca-miR194f; cas-miR194f; cfe-miR194f; cmd-miR194f; csp-miR194c; gel-miR194f; pgi-miR194f; sch-miR194e; sdi-miR194f; sgi-miR194d; sor-miR194f; zof-miR194f;

Rfam Alignments

>> mir-194  mir-194 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0021   20.6   0.0  cm       15       38 ~~           1          24 + ~~ 0.99 5'&3' 0.46
                                                               ????????? ?????  ????         NC
                                                        ~~~~~~-<<<<<<<<<-<<<<<--<<<<__~~~~~~ CS
                                             mir-194  1 <[14]*UGUAACAGCAACuCCAUGUGGAau*[47]> 85
                                                              UGUAACAGCAACUCCAUGUGGA U
                                         zof-miR194f  1 <[ 0]*UGUAACAGCAACUCCAUGUGGACU*[ 0]> 24
                                                        ......***********************8...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR