Entry

ID: csp-miR181d
Alias: F20206.N000031.A11
Sequence: AACAUUCAACGCUGUCGGUGAGC
Description: mir-181 microRNA precursor predicted,partially
Species: 贴梗海棠 Species latin name: Chaenomeles speciosa
TCM Name: Mugua(木瓜)
TCM Resource (Sample number): 木瓜(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR181f; bca-miR181d; cfe-miR181e; cit-miR181g; cmd-miR181d; cof-miR181c; csp-miR181d; ehu-miR181b; hcr-miR181e; poe-miR181f; sor-miR181g;

Rfam Alignments

>> mir-181  mir-181 microRNA precursor
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0015   20.9   0.0  cm        9       31 ~~           1          23 + ~~ 1.00 5'&3' 0.52
                                ?? ?????   ??????? ??       NC
                         ~~~~~--<<-<<<<<---<<<<<<<-<<~~~~~~ CS
              mir-181  1 <[8]*AACAUUCAACGCUGUCGgUGAGU*[45]> 76
                              AACAUUCAACGCUGUCGGUGAG
          sor-miR181g  1 <[0]*AACAUUCAACGCUGUCGGUGAGC*[ 0]> 23
                         .....***********************...... PP

Targets

Predicted by TargetFinder

NM_001371783 ; NM_198461 ;

Predicted by TAPIR