Accession: B16636789

Entry
Homologs
Rfam Alignments
Targets

Entry

ID: cit-lin-4u
Alias: F44011.M000054.A11*
Sequence: UCCCUGGGACCCUAACUUGUGA
Description: lin-4 microRNA precursor predicted,partially
Species: 菊苣 Species latin name: Cichorium intybus
TCM Name: Juju(菊苣)
TCM Resource (Sample number): 菊苣(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

cit-lin-4u; poe-lin-4o; sor-lin-4v;

Rfam Alignments

>> lin-4  lin-4 microRNA precursor
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0067   18.7   0.0  cm        7       28 ~~           1          22 + ~~ 1.00 5'&3' 0.55
                               ??? ???? ??? ????????       NC
                         ~~~~~-<<<-<<<<-<<<-<<<<<<<<~~~~~~ CS
                lin-4  1 <[6]*UCCCUGAGACCccAAcuuGUGA*[43]> 71
                              UCCCUG GACCC AACUUGUGA
           sor-lin-4v  1 <[0]*UCCCUGGGACCCUAACUUGUGA*[ 0]> 22
                         .....**********************...... PP

Targets

Predicted by TargetFinder

NM_025245 ; NR_038198 ;

Predicted by TAPIR

NM_001039999 ; NM_024078 ; NM_025245 ; NR_038198 ; NR_108100 ;