The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR27
  5. cit-miR27ay

Accession: B16550328

Entry

ID: cit-miR27ay
Alias: F3421.N000112.A11
Sequence: UUCACAGUGGCUAAGUUCUGCAA
Description: microRNA mir-27 predicted
Species: 菊苣  Species latin name: Cichorium intybus
TCM Name: Juju(菊苣)  
TCM Resource (Sample number): 菊苣(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR27g; bca-miR27f; bch-miR27g; bpi-miR27d; cfe-miR27h; cit-miR27ay; cmd-miR27ak; cof-miR27c; hcr-miR27am; poe-miR27am; ppr-miR27d; sgi-miR27d; sor-miR27at; tch-miR27d; zof-miR27e;

Rfam Alignments

>> mir-27  microRNA mir-27
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00059   21.8   0.0  cm       56       77 ~.           1          22 + ~. 1.00    5' 0.45
                              ?????  ???????????     NC
                        ~~~~~~>>>>>-->>>>>>>>>>>:::: CS
              mir-27 15 <[41]*uUCACAGuGGCUAAGuuCuGCu 77
                              UUCACAGUGGCUAAGUUCUGC+
          zof-miR27e  1 <[ 0]*UUCACAGUGGCUAAGUUCUGCA 22
                        ......********************** PP

Targets

Predicted by TargetFinder


Predicted by TAPIR