Accession: B16475415

Entry
Homologs
Rfam Alignments
Targets

Entry

ID: cit-miR1ba
Alias: F574.N000227.A11
Sequence: UGGAAUGUAAAGAAGUAUGUAUG
Description: mir-1 microRNA precursor family predicted,partially
Species: 菊苣 Species latin name: Cichorium intybus
TCM Name: Juju(菊苣)
TCM Resource (Sample number): 菊苣(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

asc-miR1j; cit-miR1ba; cmd-miR1as; cof-miR1j; fmu-miR1j; hcr-miR1aq; poe-miR1ax; sch-miR1k; sor-miR1ax; zof-miR1o;

Rfam Alignments

>> mir-1  mir-1 microRNA precursor family
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0039   20.8   0.0  cm       49       70 ~.           1          22 + ~. 1.00    5' 0.27
                              ??? ?????????????????? NC
                        ~~~~~~>>>->>>>>>>>>>>>>>>>>> CS
               mir-1  8 <[41]*UGGAAUgUAAaGAAGuAUGuag 70
                              UGGAAUGUAAAGAAGUAUGUA
           zof-miR1o  1 <[ 0]*UGGAAUGUAAAGAAGUAUGUAU 22
                        ......********************** PP

Targets

Predicted by TargetFinder

Predicted by TAPIR

NM_005562 ; NM_005562 ;