The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR10
  5. cit-miR10bi

Accession: B16623237

Entry

ID: cit-miR10bi
Alias: F29943.N000334.A11
Sequence: AACCCGUAGAUCCGAUCUUGUGC
Description: mir-10 microRNA precursor family predicted,partially
Species: 菊苣  Species latin name: Cichorium intybus
TCM Name: Juju(菊苣)  
TCM Resource (Sample number): 菊苣(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR10at; acr-miR10g; bca-miR10q; cfe-miR10ar; cit-miR10bi; cmd-miR10as; poe-miR10bc; ppr-miR10p; sor-miR10be; tki-miR10t; zof-miR10m;

Rfam Alignments

>> mir-10  mir-10 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0045   18.1   0.0  cm        8       31 ~~           1          23 + ~~ 0.99 5'&3' 0.52
                                ???   ???????????????        NC
                         ~~~~~--<<<---<<<<<<<<<<<<<<<_~~~~~~ CS
               mir-10  1 <[7]*UACCCUGUAGAucCGAacuUGUGu*[44]> 75
                              +ACCC GUAGAUCCGA CUUGUG
           zof-miR10m  1 <[0]*AACCC-GUAGAUCCGAUCUUGUGC*[ 0]> 23
                         .....*****.******************...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR