The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR10
  5. cit-miR10aj

Accession: B16581990

Entry

ID: cit-miR10aj
Alias: F8347.O000103.A11
Sequence: UACCCUGUAGAUCCGAAUUUGUGA
Description: mir-10 microRNA precursor family predicted,partially
Species: 菊苣  Species latin name: Cichorium intybus
TCM Name: Juju(菊苣)  
TCM Resource (Sample number): 菊苣(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR10ah; bca-miR10g; cci-miR10c; cfe-miR10ag; cit-miR10aj; cmd-miR10ah; csp-miR10f; esn-miR10g; fsu-miR10e; hcr-miR10g; ljn-miR10f; poe-miR10ah; ppr-miR10g; pvl-miR10g; sgi-miR10g; sor-miR10aj; tki-miR10g; zof-miR10e;

Rfam Alignments

>> mir-10  mir-10 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00017   22.6   0.0  cm        8       31 ~~           1          24 + ~~ 1.00 5'&3' 0.42
                                ???   ???????????????        NC
                         ~~~~~--<<<---<<<<<<<<<<<<<<<_~~~~~~ CS
               mir-10  1 <[7]*UACCCUGUAGAucCGAacuUGUGu*[44]> 75
                              UACCCUGUAGAUCCGAA UUGUG
           zof-miR10e  1 <[0]*UACCCUGUAGAUCCGAAUUUGUGA*[ 0]> 24
                         .....************************...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR