The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR103
  5. cit-miR103f

Accession: B16604242

Entry

ID: cit-miR103f
Alias: F16365.N000039.A11
Sequence: AGCGGCAUUGUACAGGGCUAUGA
Description: mir-103/107 microRNA precursor predicted,partially
Species: 菊苣  Species latin name: Cichorium intybus
TCM Name: Juju(菊苣)  
TCM Resource (Sample number): 菊苣(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

bch-miR103c; cit-miR103f; hcr-miR103e; sor-miR103h; vph-miR103b;

Rfam Alignments

>> mir-103  mir-103/107 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0039   19.6   0.0  cm       48       70 ~~           1          23 + ~~ 1.00 5'&3' 0.52
                                ???????????    ??   ??      NC
                         ~~~~~~_>>>>>>>>>>>---->>--->>~~~~~ CS
              mir-103  1 <[47]*AGCAgCAuUGUACAGGGCUAUgA*[8]> 78
                               AGC GCAUUGUACAGGGCUAUGA
          vph-miR103b  1 <[ 0]*AGCGGCAUUGUACAGGGCUAUGA*[0]> 23
                         ......***********************..... PP

Targets

Predicted by TargetFinder

NM_002180 ;   NR_031721 ;   NR_031722 ;  

Predicted by TAPIR

NM_002180 ;   NR_031721 ;   NR_031722 ;