The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR30
  5. cci-miR30ah

Accession: B13942170

Entry

ID: cci-miR30ah
Alias: F3769.O000192.A25
Sequence: UGUAAACAUCCCCGACUGGAAGCG
Description: mir-30 microRNA precursor predicted,partially
Species: 鸡冠花  Species latin name: Celosia cristata
TCM Name: Jiguanhua(鸡冠花)  
TCM Resource (Sample number): 鸡冠花(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR30aq; acr-miR30f; asc-miR30ai; cba-miR30f; cci-miR30ah; cfe-miR30aj; cit-miR30co; cmd-miR30aw; cof-miR30g; csp-miR30f; csu-miR30e; epr-miR30e; est-miR30b; fmu-miR30af; hof-miR30c; ljp-miR30af; lln-miR30c; nnu-miR30d; poe-miR30bg; sdf-miR30h; sor-miR30cl; tch-miR30ah; tki-miR30aj; zof-miR30ak;

Rfam Alignments

>> mir-30  mir-30 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0004   24.9   0.0  cm        1       24 [~           1          24 + [~ 1.00    3' 0.54
                                                          ??????????  ???????????       NC
                                                         :<<<<<<<<<<--<<<<<<<<<<<~~~~~~ CS
                                               mir-30  1 UGuAAACAUCcUcGACuGgaAGCu*[36]> 60
                                                         UGUAAACAUCC+CGACUGGAAGC
                                          zof-miR30ak  1 UGUAAACAUCCCCGACUGGAAGCG*[ 0]> 24
                                                         ***********************9...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR