The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR30
  5. cci-miR30am

Accession: B13942176

Entry

ID: cci-miR30am
Alias: F3769.O000208.A11
Sequence: UGUAAACAUCCUCGACUGGAAGCA
Description: mir-30 microRNA precursor predicted,partially
Species: 鸡冠花  Species latin name: Celosia cristata
TCM Name: Jiguanhua(鸡冠花)  
TCM Resource (Sample number): 鸡冠花(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR30aw; asc-miR30ao; bca-miR30aj; bhi-miR30ah; cci-miR30am; cfe-miR30ao; cit-miR30da; cmd-miR30be; cof-miR30l; fmu-miR30aj; hcr-miR30aw; ljp-miR30ak; poe-miR30br; ppr-miR30al; sdf-miR30m; sor-miR30cw; tki-miR30ao; zof-miR30aq;

Rfam Alignments

>> mir-30  mir-30 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00025   25.7   0.0  cm        1       24 [~           1          24 + [~ 1.00    3' 0.46
                          ??????????  ???????????       NC
                         :<<<<<<<<<<--<<<<<<<<<<<~~~~~~ CS
               mir-30  1 UGuAAACAUCcUcGACuGgaAGCu*[36]> 60
                         UGUAAACAUCCUCGACUGGAAGC
          zof-miR30aq  1 UGUAAACAUCCUCGACUGGAAGCA*[ 0]> 24
                         ************************...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR