The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR30
  5. cba-miR30a

Accession: B13643459

Entry

ID: cba-miR30a
Alias: F3769.M000040.A25*
Sequence: CUUUCAGUCGGAUGUUUACAGC
Description: mir-30 microRNA precursor predicted,partially
Species: 金毛狗  Species latin name: Cibotium barometz
TCM Name: Gouji(狗脊)  
TCM Resource (Sample number): 狗脊(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR30ad; Bswzz-miR30a; asc-miR30ac; bpi-miR30b; cba-miR30a; cfe-miR30ac; cit-miR30al; cmd-miR30ae; cmi-miR30b; hcr-miR30ac; lgr-miR30a; poe-miR30ae; ppr-miR30ac; sgi-miR30ab; sor-miR30ak; tch-miR30ab; tki-miR30ac; zof-miR30ab;

Rfam Alignments

>> mir-30  mir-30 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0019   22.3   0.0  cm       41       60 ~]           1          20 + ~. 1.00    5' 0.40
                                                                 ???????????????????  NC
                                                           ~~~~~~>>>>>>>>>>>>>>>>>>>: CS
                                                 mir-30  1 <[40]*CUuuCaGUCgGAUGUUUgCu 60
                                                                 CUUUCAGUCGGAUGUUU C+
                                            zof-miR30ab  1 <[ 0]*CUUUCAGUCGGAUGUUUACA 20
                                                           ......******************** PP

Targets

Predicted by TargetFinder


Predicted by TAPIR