The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR126
  5. cas-miR126c

Accession: B13171590

Entry

ID: cas-miR126c
Alias: F950.N000036.A11
Sequence: UCGUACCGUGAGUAAUAAUGCGU
Description: microRNA mir-126 predicted
Species: 积雪草  Species latin name: Centella asiatica
TCM Name: Jixuecao(积雪草)  
TCM Resource (Sample number): 积雪草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR126f; asc-miR126d; bca-miR126c; bch-miR126d; cas-miR126c; cfe-miR126d; cit-miR126g; cmd-miR126e; hcr-miR126f; pfr-miR126c; poe-miR126f; ppr-miR126c; sgi-miR126c; sor-miR126g; vph-miR126d; zof-miR126d;

Rfam Alignments

>> mir-126  microRNA mir-126
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0046   19.6   0.0  cm       46       68 ~~           1          23 + ~~ 1.00 5'&3' 0.43
                               ??????? ???????????         NC
                        ~~~~~~->>>>>>>->>>>>>>>>>>:::~~~~~ CS
             mir-126  1 <[45]*UCGUACCgUgAGUAAUAAUGCgc*[5]> 73
                              UCGUACCGUGAGUAAUAAUGCG+
         zof-miR126d  1 <[ 0]*UCGUACCGUGAGUAAUAAUGCGU*[0]> 23
                        ......***********************..... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR