The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR7
  5. cof-miR7f

Accession: B21854999

Entry

ID: cof-miR7f
Alias: F98069.O000079.A11
Sequence: UGGAAGACUAGUGAUUUUGUUGUA
Description: mir-7 microRNA precursor predicted,partially
Species: 山茱萸  Species latin name: Cornus officinalis
TCM Name: Shanzhuyu(山茱萸)  
TCM Resource (Sample number): 山茱萸(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR7l; cmd-miR7j; cof-miR7f; tki-miR7j;

Rfam Alignments

>> mir-7  mir-7 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00084   23.0   0.0  cm       15       38 ~~           1          24 + ~~ 1.00 5'&3' 0.33
                                ??       ????? ????????       NC
                         ~~~~~~-<<-------<<<<<-<<<<<<<<~~~~~~ CS
                mir-7  1 <[14]*UGGAAGACUAGuGAuUUUgUUGUu*[50]> 88
                               UGGAAGACUAGUGAUUUUGUUGU
            tki-miR7j  1 <[ 0]*UGGAAGACUAGUGAUUUUGUUGUA*[ 0]> 24
                         ......************************...... PP

Targets

Predicted by TargetFinder

NM_001005353 ;   NM_001330616 ;   NM_013410 ;   NM_203464 ;   NR_039867 ;  

Predicted by TAPIR

NR_039867 ;