Entry

ID: cof-miR23d
Alias: F32880.J000020.A11*
Sequence: AUCACAUUGCCAGGGAUUU
Description: microRNA mir-23 predicted
Species: 山茱萸 Species latin name: Cornus officinalis
TCM Name: Shanzhuyu(山茱萸)
TCM Resource (Sample number): 山茱萸(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR23k; bca-miR23k; bch-miR23h; cfe-miR23i; cit-miR23be; cof-miR23d; hcr-miR23n; poe-miR23ap; sor-miR23bc; vph-miR23d;

Rfam Alignments

>> mir-23  microRNA mir-23
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00086   20.3   0.0  cm       47       65 ~~           1          19 + ~~ 1.00 5'&3' 0.42
                   ???      ?????????        NC
             ~~~~~~>>>------>>>>>>>>>:~~~~~~ CS
   mir-23  1 <[46]*AUCACAUUGCCAGGGAuUu*[10]> 75
                   AUCACAUUGCCAGGGAUUU
vph-miR23d  1 <[ 0]*AUCACAUUGCCAGGGAUUU*[ 0]> 19
             ......*******************...... PP

Targets

Predicted by TargetFinder

NM_000084 ; NM_001004467 ; NM_001024611 ; NM_001104586 ; NM_001127898 ; NM_001127899 ; NM_001134382 ; NM_001145664 ; NM_001165927 ; NM_001184773 ; NM_001184774 ; NM_001184775 ; NM_001184776 ; NM_001256850 ; NM_001257197 ; NM_001257198 ; NM_001267550 ; NM_001282163 ; NM_001282910 ; NM_001282911 ; NM_001282912 ; NM_001321268 ; NM_001321269 ; NM_001322427 ; NM_001322428 ; NM_001322429 ; NM_001330397 ; NM_001330619 ; NM_001352676 ; NM_001352677 ; NM_001352678 ; NM_001352679 ; NM_001366652 ; NM_001366655 ; NM_001366657 ; NM_001367508 ; NM_001367509 ; NM_001367510 ; NM_001374295 ; NM_001977 ; NM_002279 ; NM_003319 ; NM_003590 ; NM_004525 ; NM_005569 ; NM_006734 ; NM_014869 ; NM_015035 ; NM_016733 ; NM_017777 ; NM_018057 ; NM_021115 ; NM_024744 ; NM_025153 ; NM_133378 ; NM_133432 ; NM_133437 ; NM_194286 ; NM_205847 ; NR_034134 ; NR_046099 ; NR_121604 ; NR_136330 ; NR_136331 ; NR_148033 ; NR_148034 ;

Predicted by TAPIR

NM_001024611 ; NM_001165927 ; NM_001184773 ; NM_001256850 ; NM_001321268 ; NM_001321269 ; NM_001330397 ; NM_001365923 ; NM_001365924 ; NM_001365925 ; NM_001365926 ; NM_001365927 ; NM_001365928 ; NM_001365929 ; NM_001365930 ; NM_001365931 ; NM_001365932 ; NM_001365933 ; NM_001365934 ; NM_001365935 ; NM_001365936 ; NM_001374295 ; NM_003590 ; NM_014932 ; NM_017777 ; NM_133378 ; NM_133432 ; NM_133437 ; NM_205847 ; NR_034009 ;

The Bencao (Herbal) Database（本草数据库）

Accession: B21742244