The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR122
  5. cof-miR122e

Accession: B21762380

Entry

ID: cof-miR122e
Alias: F39800.N000180.A11
Sequence: UGGAGUGUGACGAUGGUGUUUGU
Description: mir-122 microRNA precursor predicted,partially
Species: 山茱萸  Species latin name: Cornus officinalis
TCM Name: Shanzhuyu(山茱萸)  
TCM Resource (Sample number): 山茱萸(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR122h; cof-miR122e; csp-miR122f;

Rfam Alignments

>> mir-122  mir-122 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0058   18.9   0.0  cm        9       31 ~~           1          23 + ~~ 1.00 5'&3' 0.48
                              ?  ??????? ???????????        NC
                         ~~~~~<--<<<<<<<-<<<<<<<<<<<_~~~~~~ CS
              mir-122  1 <[8]*UGGAGUGUGACaAUGGuGUUUGU*[43]> 74
                              UGGAGUGUGAC AUGGUGUUUGU
          csp-miR122f  1 <[0]*UGGAGUGUGACGAUGGUGUUUGU*[ 0]> 23
                         .....***********************...... PP

Targets

Predicted by TargetFinder

NR_039899 ;  

Predicted by TAPIR

NR_039899 ;